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Resource NamingSystem/FHIR Server from package hl7.terminology#current (31 ms)

Package hl7.terminology
Type NamingSystem
Id Id
FHIR Version R5
Source http://terminology.hl7.org/https://build.fhir.org/ig/HL7/UTG/NamingSystem-v3-hgvs.html
Url http://terminology.hl7.org/NamingSystem/v3-hgvs
Version 2.1.0
Status active
Date 2019-03-20T00:00:00-04:00
Name Hgvs
Title Human Genome Variation Society nomenclature
Experimental False
Realm uv
Authority hl7
Description HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society. HGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS| Versioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007 HGVS nomenclatures can be used freely by the public.
Kind codesystem

Resources that use this resource

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Resources that this resource uses

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Narrative

Note: links and images are rebased to the (stated) source

Generated Narrative: NamingSystem v3-hgvs

Summary

Defining URLhttp://terminology.hl7.org/NamingSystem/v3-hgvs
Version2.1.0
NameHgvs
TitleHuman Genome Variation Society nomenclature
Statusactive
Definition

HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.

HGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|

Versioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007

HGVS nomenclatures can be used freely by the public.

PublisherHUGO Gene Nomenclature Committee

Identifiers

TypeValuePreferred
OID2.16.840.1.113883.6.282true
URIhttp://varnomen.hgvs.orgtrue

Source

{
  "resourceType" : "NamingSystem",
  "id" : "v3-hgvs",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: NamingSystem v3-hgvs</b></p><a name=\"v3-hgvs\"> </a><a name=\"hcv3-hgvs\"> </a><a name=\"v3-hgvs-en-US\"> </a><h3>Summary</h3><table class=\"grid\"><tr><td>Defining URL</td><td>http://terminology.hl7.org/NamingSystem/v3-hgvs</td></tr><tr><td>Version</td><td>2.1.0</td></tr><tr><td>Name</td><td>Hgvs</td></tr><tr><td>Title</td><td>Human Genome Variation Society nomenclature</td></tr><tr><td>Status</td><td>active</td></tr><tr><td>Definition</td><td><div><p>HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.</p>\n<p>HGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C&gt;T^^HGVS|</p>\n<p>Versioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007</p>\n<p>HGVS nomenclatures can be used freely by the public.</p>\n</div></td></tr><tr><td>Publisher</td><td>HUGO Gene Nomenclature Committee</td></tr></table><h3>Identifiers</h3><table class=\"grid\"><tr><td><b>Type</b></td><td><b>Value</b></td><td><b>Preferred</b></td></tr><tr><td>OID</td><td>2.16.840.1.113883.6.282</td><td>true</td></tr><tr><td>URI</td><td>http://varnomen.hgvs.org</td><td>true</td></tr></table></div>"
  },
  "url" : "http://terminology.hl7.org/NamingSystem/v3-hgvs",
  "version" : "2.1.0",
  "name" : "Hgvs",
  "title" : "Human Genome Variation Society nomenclature",
  "status" : "active",
  "kind" : "codesystem",
  "date" : "2019-03-20T00:00:00-04:00",
  "publisher" : "HUGO Gene Nomenclature Committee",
  "responsible" : "HUGO Gene Nomenclature Committee",
  "description" : "HGVS nomenclatures are the guidelines for mutation nomenclature made by the Human Genome Variation Society.\r\n\r\nHGVS nomenclature can be used with the HL7 coded data type (code data type that accepts expression data, or a coded expression data type). This coded data type should be able to distinguish expressions in HGVS nomenclature from coded concepts. For example, in the HL7 messages specified according to the HL7 V2 Clinical Genomics Fully LOINC-Qualified Genetic Variation Model, HGVS nomenclature can be used to as the observation values for DNA sequence variations. For example, OBX|1|CWE|48004-6^DNA Sequence Variation^LN||c.1129C>T^^HGVS|\r\n\r\nVersioning information: The HGVS nomenclature for the description of sequence variants was last modified Feb 20, 2008. The HGVS nomenclature for the description of protein sequence variants was last modified May 12, 2007. The HGVS nomenclature for the description of DNA sequence variants was last modified June 15, 2007 The HGVS nomenclature for the description of RNA sequence variants was last modified May 12, 2007\r\n\r\nHGVS nomenclatures can be used freely by the public.",
  "uniqueId" : [
    {
      "type" : "oid",
      "value" : "2.16.840.1.113883.6.282",
      "preferred" : true
    },
    {
      "type" : "uri",
      "value" : "http://varnomen.hgvs.org",
      "preferred" : true
    }
  ]
}

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